Shotgun Proteomics: Methods and Protocols (Hardcover, 2021)

· 제목 : Shotgun Proteomics: Methods and Protocols (Hardcover, 2021) 
· 분류 : 외국도서 > 과학/수학/생태 > 과학 > 생명과학 > 생화학
· ISBN : 9781071611777
· 쪽수 : 324쪽
· 출판일 : 2021-03-10

Part I: Shotgun Proteomics of Extracellular Vesicles and Subcellular Structures

1. Mesenchymal Stem Cell - Derived Extracellular Vesicles Isolation and their Protein Cargo Characterisation

Miriam Morente-Lopez, Juan A. Fafian-Labora, Monica Carrera, Francisco J. de Toro, Concha Gil, Jesus Mateos, and Maria C. Arufe

 

2. Clinical Proteomics for the Analysis of Circulating Extracellular Vesicles

Maria N. Barrachina and Angel Garcia

 

3. Utilization of Laser Capture Microdissection Coupled to Mass Spectrometry to Uncover the Proteome of Cellular Protrusions

Ana Gordon and Karine Gousset

 

Part II: Shotgun Proteomics of Non-Model Organisms

4. Isolation of Apoplastic Fluid From Woody Plants Leaves: Grapevine and Coffee as a Case Study

Andreia Figueiredo and Leonor Guerra-Guimaraes

 

5. Shotgun Proteomics for L3 and L4 Anisakis simplex Development Stages

Robert Stryi?ski, Jesus Mateos, El?bieta Łopie?ska-Biernat, and Monica Carrera

 

6. A Primer and Guidelines for Shotgun Proteomic Analysis in Non-Model Organisms

Angel P. Diz and Paula Sanchez-Marin

 

Part III: Clinical Proteomics

7. SWATH-MS Protocols in Human Diseases

Maria del Pilar Chantada-Vazquez, Maria Garcia Vence, Antonio Serna, Cristina Nunez C and Susana B. Bravo

 

8. Serum Proteomic Profiling in Rheumatoid Arthritis by Antibody Suspension Bead Arrays

Lucia Lourido, Rocio Paz, Cristina Ruiz-Romero, Peter Nilsson and Francisco J. Blanco

 

9. Human Blood Plasma Investigation Employing
2d Uplc-Udms^e Data-Independent Acquisition Proteomics

Licia C. Silva-Costa, Bradley J. Smith, Pamela T. Carlson, Gustavo H. M. F. Souza, and Daniel Martins-de-Souza

 

10. Metaproteomics Analysis of Host-Microbiota Interfaces

Sjoerd van der Post and Liisa Arike

 

11. Mass Spectrometry-Based Analysis of Mycobacterial Single-Colony Proteome

John Iradukunda, Tariq Ganief, Jonathan M. Blackburn and Nelson C. Soares

 

12. Proteogenomic Approach for Mycobacterium Tuberculosis Investigation

Julia Bespyatykh, Georgij Arapidi, and Egor Shitikov

 

Part IV: Food Proteomics

13. Shotgun Proteomics for Food Microorganism Detection

Ana G. Abril, Ignacio Ortea, Jorge Barros-Velazquez, Tomas G. Villa, and Pilar Calo-Mata

 

14. Shotgun Proteomics and Protein-Based Bioinformatics for the Characterization of Food-Derived Bioactive Peptides

Monica Carrera, Manuel Pazos, Santiago P. Aubourg and Jose M. Gallardo

 

Part V: Analysis of Postranslational Modifications and Protein Complexes

15. FTSC-labeling Coupled with 2DE-LC-MS/MS Analysis of Complex Protein Mixtures for Identification and Relative Quantification of Tissue Carbonylome

Lucia Mendez, Lorena Barros, Silvia Munoz and Isabel Medina

 

16. Mass Spectrometry-Based Proteomics for Analysis of Hydrophilic Phosphopeptides

Chia-Feng Tsai, Jeffrey S. Smith, Dylan S. Eiger, Kendall Martin, Tao Liu, Richard D Smith, Tujin Shi, Sudarshan Rajagopal and Jon M. Jacobs

 

17. Rapid Shotgun Phosphoproteomics Analysis

Monica Carrera, Benito Canas and Daniel Lopez-Ferrer

 

18. System-wide Profiling Of Protein-Complexes Via Size Exclusion Chromatography?Mass Spectrometry (SEC-MS)

Fossati Andrea, Fabian Frommelt, Federico Uliana, Claudia Martelli, Matej Vizovisek, Ludovic Gillet, Collins Ben, Matthias Gstaiger and Ruedi Aebersold

 

 

Part VI: Shotgun Proteomics Data Processing and Storage

19. Qualitative and Quantitative Shotgun Proteomics Data Analysis from Data-Dependent Acquisition Mass Spectrometry

Jesse G. Meyer