Bioinformatics: High Performance Parallel Computer Architectures (Hardcover)

Algorithms for Bioinformatics, B. Schmidt

Introduction to GPGPUs and Massively Threaded Programming, R.M. Farber

FPGA: Architecture and Programming, D. Maskell

Parallel Algorithms for Alignments on the Cell BE, A. Sarje and S. Aluru

Orchestrating the Phylogenetic Likelihood Function on Emerging Parallel Architectures, A. Stamatakis

Parallel Bioinformatics Algorithms for CUDA-enabled GPUs, Y. Liu, B. Schmidt, and D. Maskell

CUDA Error Correction Method for High-Throughput Short-Read Sequencing Data, H. Shi, W. Liu, and B. Schmidt

FPGA Acceleration of Seeded Similarity Searching, A.C. Jacob, J.M. Lancaster, J.D. Buhler, and R.D. Chamberlain

Seed-Based Parallel Protein Sequence Comparison Combining Multithreading, GPU, and FPGA Technologies, D. Lavenier and V.-H. Nguyen

Database Searching with Profi le Hidden Markov Models on Reconfi gurable and Many-Core Architectures, J.P.Walters, V. Chaudhary, and B. Schmidt

COPACOBANA: A Massively Parallel FPGA-Based Computer Architecture, M. Schimmler, L. Wienbrandt, T. Guneysu, and J. Bissel

Accelerating String Set Matching for Bioinformatics Using FPGA Hardware, Y.S. Dandass

Reconfi gurable Neural System and its Application to Dimeric Protein Binding Site Identification, F. Lin and M. Stepanova

Parallel FPGA Search Engine for Protein Identification, D. Coca, I. Bogdan, and R.J. Beynon

Index