Protein Folds: A Distance-Based Approach (Hardcover)

Introduction, H. Bohr and S. BrunakOverviewThree Paradoxes of Protein Folding, P.G. WolynesProtein-Ligand Complexes and Protein BiosynthesisConserved Water Molecules and Protein Folding in Fungal Peroxidases, S. Larsen and J.F.W. PetersenInterplay between Metal Coordination Geometry and Protein Structure, R. Bauer, M. Bjerrum, E. Danielsen, E. Friis, J.M. Hammerstad, L. Hemmingsen, M.V. Pedersen, and J. UlstrupElongation Factor Tu: A G-Protein in Protein Biosynthesis, P. Nissen, M. Kjeldgaard, S. Thirup, L. Reshetnikova, G. Polekhina, B.F.C. Clark and J. NyborgElectron Transfer of the Di-Heme Protein: Pseudomonas stutzeri cytochrome c4, , J.-J. Karlsson, A. Kadziola, A. Rasmussen, T.E. Rostrup, and J. UlstrupProfile Methods for Protein Structure and Fold DeterminationSequence Matching in Homology Modelling, M. GribskovScreening Genome Sequences for Known Folds, M. Braxenthaler and M.J. SipplProtein Fold Determination Using a Small Number of Distance Restraints, A. Aszodi, M.J. Gradwell, and W.R. TaylorHow Many Protein Fold Classes Are To Be Found?, P-A. Lindgard and H. BohrDistance-Based Protein Structure Prediction and EvaluationThe Effect of a Distance-Cutoff on the Performance of The Distance Matrix Error When Used as a Potential Function to Drive Conformational Search, S. Le Grand, A. Elofsson, and D. EisenbergProtein Structure Prediction: How Self-Misleading Can Be Avoided, A. Ya. Badretdinov, A.M. Gutin, and A.V. FinkelsteinSequence Space Analysis: Identification of Functionally or Structurally Important Residues in Protein Sequence Families, G. Casari, C. Sander, and A. ValenciaFitting 1-D Predictions into 3-D Structures, B. RostDetermination of Membrane Bound Protein Structure and FunctionModelling a-helical Integral Membrane Proteins, D. Donnelly and J.B.C. FindlayUse of Small Organic Compounds and Metal-ions as Structural and Functional Probes in 7TM Receptors, T.W. Schwartz, C.E. Elling, S.M. Nielsen, K. Thirstrup, S. Zoffmann, M. Rosenkilde, D. Marchal, R. den Hollander, U. Gether, and S.A. HjorthUsing Sequence Information and Model Building to Explore Subtype Specificity in GPCRs, R. Bywater, G. Vriend, L. Oliveira, and D. van AaltenStatistical Mechanics and Kinetics of Protein Folding ProcessesProposed Rules of the Protein Folding Game, M. Crippen and V.N. MaiorovProtein Folding Studied by Monte Carlo Simulations, A. Sali, E. Shakhnovich, and M. KarplusFolding Kinetics of Protein Like Heteropolymers, N.D. Socci and J.N. OnuchicEnergy Landscape and Folding Mechanisms in Proteins, Z. Guo and D. ThirumalaiTopological Aspects of Protein FoldsResonator Driven Protein Folding: The Implication of Topology for Protein Structure and Folding, J. Bohr, H. Bohr, and S. BrunakChirality in Protein Structure, T.W.F. Slidel and J.M. ThorntonPacking within and between Subunits Defined by Internal Cavities, S.J. Hubbard and P. ArgosProtein Modelling and DockingModelling and Predicting a-helical Transmembrane Structures, W.R. Taylor and D.T. JonesHIV GP120 Docking Interactions and Inhibitor Design Based on an Atomic Structure Derived by Molecular Modelling Using the DREIDING II Force Field, J.L. Gabriel and W.M. MitchellA Model of the 3D Structure of Obelin-The Photoprotein From Obelia longissima, T. SandalovaIndex