Plant Circular RNAs: Methods and Protocols (Paperback)

Preface…
Table of Contents…
Contributing Authors…

1. Identification and Characterization of Plant Circular RNAs
Yan-Fei Zhou, Yu-Meng Sun, and Yue-Qin Chen

2. Experimental Strategies for Studying the Function of Plant circRNAs
Yan-Zhao Feng and Yang Yu

3. Generation of Transgenic Rice Expressing circRNA and its Functional Characterization
Priyanka Sharma, Ashirbad Guria, Sankar Natesan, and Gopal Pandi

4. Identification of Circular RNAs by Multiple Displacement Amplification and their Involvement in Plant Development
Ashirbad Guria, Priyanka Sharma, Sankar Natesan, and Gopal Pandi

5. Identification of Intronic Lariat-Derived Circular RNAs in Arabidopsis by RNA Deep Sequencing 
Taiyun Wang, Xiaotuo Zhang, and Binglian Zheng

6. Identification and Functional Characterization of Viroid Circular RNAs 
Jose-Antonio Daros

7. Circular RNA Databases
Peijing Zhang and Ming Chen

8. NGS Methodologies and Computational Algorithms for the Prediction and Analysis of Plant Circular RNAs
Laura Carmen Terron-Camero and Eduardo Andres-Leon

9. Computational Analysis of Transposable Elements and circRNAs in Plants
Liliane Santana Oliveira, Andressa Caroline Patera, Douglas Silva Domingues, Danilo Sipoli Sanches, Fabricio Martins Lopes, Pedro Henrique Bugatti, Priscila Tiemi Maeda Saito, Vinicius Maracaja-Coutinho, Alan Mitchell Durham, and Alexandre Rossi Paschoal

10. Constructing circRNA-miRNA-mRNA Regulatory Networks by using GreenCircRNA Database
Jinjing Zhang, Ruiqi Liu, and Guanglin Li

11. Methods for Predicting circRNA-miRNA-mRNA Regulatory Networks: GreenCircRNA and PlantCircNet Databases as Study Cases
Nureyev F. Rodrigues and Rogerio Margis

Subject Index List…