Rna-Seq Data Analysis: A Practical Approach (Hardcover)

Introduction

Introduction to RNA-seq data analysis

Quality control and preprocessing

Aligning reads to reference and visualizing them in genomic context

Transcriptome assembly

Annotation-based quality control and quantitation of gene expression

RNA-seq analysis framework in R and Bioconductor

Differential expression analysis

Analysis of differential exon usage

Annotating the results

Visualization

Small non-coding RNAs

Computational analysis of small noncoding RNA sequencing data