Serum/Plasma Proteomics: Methods and Protocols (Hardcover, 2, 2017)

Part I Updated Blood Processing and Handling Strategies 1. Direct Assessment of Plasma/Serum Sample Quality for Proteomics Biomarker Investigation Viviana Greco, Cristian Piras, Luisa Pieroni, and Andrea Urbani 2. A Protocol for the Preparation of Cryoprecipitate and Cryo-Depleted Plasma Rosemary L Sparrow, David W Greening, and Richard J Simpson 3. A Proteomic Protocol for the Preparation of Platelet Concentrates David W Greening, Richard J Simpson, and Rosemary L Sparrow Part II Updated Fractionation Strategies for In-depth Blood Proteome Analysis 4. Bead-based and Multiplexed Immunoassays for Protein Profiling via Sequential Affinity Capture Elin Birgersson, Jochen M. Schwenk, and Burcu Ayoglu 5. Affinity Proteomics for Fast, Sensitive, Quantitative Analysis of Proteins in Plasma John P O'Grady, Kevin W Meyer, and Derrick N Poe 6. Characterization of the Low-molecular Weight Human Plasma Peptidome David W. Greening and Richard J. Simpson 7. In-depth, Reproducible Analysis of Human Plasma using IgY 14 and SuperMix Immunodepletion Lynn A. Beer, Bonnie Ky, Kurt T. Barnhart, and David W. Speicher 8. Low-Molecular-Weight Plasma Proteome Analysis Using Top-Down Mass Spectrometry Dong Huey Cheon, Eun Gyeong Yang, Cheolju Lee, and Ji Eun Lee 9. Identification of Post-Translational Modifications from Serum/Plasma by Immunoaffinity Enrichment and LC-MS/MS Analysis without Depletion of Abundant Proteins Hongbo Gu, Jianmin Ren, Xiaoying Jia, and Matthew P. Stokes 10. Identification of Core-fucosylated Glycoproteome in Human Plasma Qichen Cao, Qing Zhao, Xiaohong Qian, and Wantao Ying Part III Updated Proteome Analysis of Blood Cell Components, Vesicles, and Blood-related Fluids< 11. Proteomic Analysis of Blood Extracellular Vesicles in Cardiovascular Disease by LC-MS/MS Analysis Montserrat Baldan-Martin, Fernando de la Cuesta, Gloria Alvarez-Llamas, Gema Ruiz-Hurtado, Luis M. Ruilope, and Maria G. Barderas 12. Targeted Approach For Proteomic Analysis of a Hidden Membrane Protein Tania Martins-Marques, Sandra I. Anjo, Teresa Ribeiro-Rodrigues, Bruno Manadas, and Henrique Girao 13. Red Blood Cells in Clinical Proteomics Ana Sofia Carvalho, Manuel S Rodriguez, and Rune Matthiesen 14. High-throughput Quantitative Lipidomics Analysis of Non-esterified Fatty Acids in Plasma by LC-MS Nicolas Christinat, Delphine Morin-Rivron, and Mojgan Masoodi 15. Simultaneous Enrichment of Plasma Extracellular Vesicles and Glycoproteome for Studying Disease Biomarkers Sunil S. Adav and Siu Kwan Sze 16. Lipidomics of Human Blood Plasma by High Resolution Shotgun Mass Spectrometry Susanne Sales, Oskar Knittelfelder, and Andrej Shevchenko 17. Proteomics Analysis of Circulating Serum Exosomes Antonius Koller, Purvi Patel, Jenny Kim Kim, and Emily I. Chen Part IV Antibody-based Discovery and Targeted Proteomics 18. High-density Serum/Plasma Reverse Phase Protein Arrays Cecilia Hellstrom, Tea Dodig-Crnkovic, Mun-Gwan Hong, Jochen M. Schwenk, Peter Nilsson, and Ronald Sjoberg 19. Antibody Colocalization Microarray for Cross-reactivity free Multiplexed Protein Analysis Veronique Laforte, Pik-Shan Lo, Huiyan Li, and David Juncker 20. Surface Profiling of Extracellular Vesicles From Plasma or Ascites Fluid using Dotscan Antibody Microarrays Larissa Belov, Susannah Hallal, Kieran Matic, Jerry Zhou, Sandra Wissmueller, Nuzhat Ahmed, Sumaiya Tanjil, Stephen P. Mulligan, O. Giles Best, Richard J. Simpson, and Richard I. Christopherson 21. Serum Profiling for Identification of Autoantibody Signatures in Diseases using Protein Microarrays Shabarni Gupta, Manubhai K.P., Shuvolina Mukherjee, and Sanjeeva Srivastava Part V Developments in Discovery and Targeted Proteomics 22. Quantitative Comparisons of Large Numbers of Human Plasma Samples using TMT10plex Labelling Pengyuan Liu, Lynn A. Beer, Bonnie Ky, Kurt T. Barnhart, and David W.